Browse of TCMCG007C35545 protein

CDS

Accession Number	TCMCG007C35545
gbkey	CDS
Protein Id	XP_009147998.1
Location	complement(join(2808161..2808665,2809090..2809171,2809309..2809516,2809604..2809648,2809937..2810104,2810420..2810830))
Gene	LOC103871496
GeneID	103871496
Organism	Brassica rapa

Protein

Length	472aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009149750.3
Definition	polygalacturonase At1g48100 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	G
Description	Glycosyl hydrolases family 28
KEGG_TC	-
KEGG_Module	M00081        [VIEW IN KEGG]
KEGG_Reaction	R01982        [VIEW IN KEGG] R07413        [VIEW IN KEGG]
KEGG_rclass	RC00049        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG]
KEGG_ko	ko:K01213        [VIEW IN KEGG]
EC	3.2.1.67        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00040        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] map00040        [VIEW IN KEGG] map01100        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004553        [VIEW IN EMBL-EBI] GO:0004650        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005618        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009664        [VIEW IN EMBL-EBI] GO:0009825        [VIEW IN EMBL-EBI] GO:0009827        [VIEW IN EMBL-EBI] GO:0009831        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016049        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016798        [VIEW IN EMBL-EBI] GO:0030312        [VIEW IN EMBL-EBI] GO:0040007        [VIEW IN EMBL-EBI] GO:0042545        [VIEW IN EMBL-EBI] GO:0042547        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045229        [VIEW IN EMBL-EBI] GO:0071554        [VIEW IN EMBL-EBI] GO:0071555        [VIEW IN EMBL-EBI] GO:0071669        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCGCATTCTCAGTGGCATTCTCGTGGTTTACTTCATCTCCACTCTCCTCTTTGGTCAATTAATCTACGTTGCACGAGGAAGATTTCATTACCACAAGAGACGCGGTCTCTCGGATCCTCCTCCTCCTCCTCCAGCTGTAACCGCTAACCCACCTCAAGTCCCCTCTGACCCGTACCCAAACCCGAATCCAGACCCGGCTCCAGGAGATTCAGACTCGGGATGCATTTTTGACGTGACGTCGTTCGGGGCAGTAGGTGATGGCTCGTGTGACGATACGGCAGCATTTAAAGATGCGTGGAAAGCCGCTTGTGCTGTTGAATCCAGTGTCGTTTTAGCTCCTGAAGGCGGCGTTTTTAAAATCACTTCCACTATTTTCTCCGGTCCATGTAAACCGGGACTCGTCTTTCAGTTGGATGGAGTGTTAATGCCTCCGGATGGACCAGAGGAGTGGCCAGAGAAGGACAGTAAAAGTCAATGGTTAGTTTTTTACCGCCTCGATGGTTTCACGTTTGCCGGCAAAGGCACCGTCGAAGGCAACGGTCAAAAATGGTGGGACTTACCTTGCAAGCCTCATCGGGGACCAGACGGATCATCGTCGTCCGAACCATGTGTTAGTCCAACTATGATTCGGTTCTTCATGAGCAACAACATCGAGGTTGGAGGATTGAGAATCCAAAACAGCCCGCAATTTCACATGAAATTCGACGGATGCGAAGGAGTGTCAATCAACGATATCCAGATTTCATCTCCTAAACTCAGTCCCAACACTGATGGTATCCATCTCGGGAACACCAGATCAGTGGCCATTCATAACTCTGTCGTTAGCAACGGGGATGACTGCATTTCTATTGGAACTGGTTGTTCAGACATTGACATTCAAGGTGTCACTTGTGGGCCCAGTCACGGGATCAGCATCGGGAGTTTAGGAGTGCACAATTCTCAAGCATGCGTTTCCAACATAACCGTCCGAAACACCGTGATCCGCGATTCCGACAACGGCCTCAGAGTCAAAACATGGCAAGGCGGAACCGGATCCGTCTCTAATCTCCTGTTCGAGAACATCCAGATGGAGAACGTCCTAAACTGCATCATCGTCGATCAATACTACTGCCAATCCAAGGAGTGCCGCAACGAGACGTCCGCGGTTCGAGTCTTCGACGTCCAGTACCGTAACATCAAAGGGACTTACGACGTCAGAAGCGCGCCAATTCACTTCGCATGTAGCGACACCGTCGCTTGTACAAACATTACAATGTCCGAGGTCGAGCTTTTGCCCGAGGAAGGAGAGCTCGTGGATGATCCGTTTTGTTGGAACGCTTATGGGACTCAAGAGACGTTGACAATTCCGCCAATTGATTGTTTGCTTGATGGATCACCGGTGGTGGAGGAAGGCTATAATTCGAATCCGGGTTGCTGA

Protein:   MRILSGILVVYFISTLLFGQLIYVARGRFHYHKRRGLSDPPPPPPAVTANPPQVPSDPYPNPNPDPAPGDSDSGCIFDVTSFGAVGDGSCDDTAAFKDAWKAACAVESSVVLAPEGGVFKITSTIFSGPCKPGLVFQLDGVLMPPDGPEEWPEKDSKSQWLVFYRLDGFTFAGKGTVEGNGQKWWDLPCKPHRGPDGSSSSEPCVSPTMIRFFMSNNIEVGGLRIQNSPQFHMKFDGCEGVSINDIQISSPKLSPNTDGIHLGNTRSVAIHNSVVSNGDDCISIGTGCSDIDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKECRNETSAVRVFDVQYRNIKGTYDVRSAPIHFACSDTVACTNITMSEVELLPEEGELVDDPFCWNAYGTQETLTIPPIDCLLDGSPVVEEGYNSNPGC